CDS
| Accession Number | TCMCG057C06970 |
| gbkey | CDS |
| Protein Id | XP_018470947.1 |
| Location | join(26809172..26809386,26809605..26809767,26809857..26809949,26810051..26810156,26810246..26810429,26810791..26810962,26811250..26811375,26811498..26812064,26812188..26812757,26813098..26813166,26813439..26813555,26813635..26813880,26814096..26814143,26814230..26814367,26814451..26814555,26814666..26814728,26814798..26814905,26815019..26815102,26815198..26815245,26815372..26815446,26815531..26815626,26815768..26815848,26815936..26816007,26816097..26816141,26816239..26816322,26816464..26816567,26816680..26816767,26816813..26817334) |
| Gene | LOC108842511 |
| GeneID | 108842511 |
| Organism | Raphanus sativus |
Protein
| Length | 1462aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018615445.1 |
| Definition | PREDICTED: symplekin isoform X4 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Domain of unknown function (DUF3453) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] ko03021 [VIEW IN KEGG] |
| KEGG_ko |
ko:K06100
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03015
[VIEW IN KEGG] ko04530 [VIEW IN KEGG] map03015 [VIEW IN KEGG] map04530 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGTGGGAACCATCATGGCTTCTTCGTATAAGCTTCAAGGTCTCGCGAGATCCGCCAAATCAGCCACCGATTTGCCTCCGAAGCTCCACCGCTTACGCAATCTGCGTCTGAATTTGAAAGGAGATCCCTCCGCTTCTTTCCCCACAGAGCTTCTTCCTCTCCTCTTCGATCTCCTCTCTGATCAATTCGGTGCTGTCCGCAAGTTTGTCGCCGAGATTCTTGGTGAAATTGGTTTGAACTATGTGGAATTGTTACCTGAGATAGTTCCCCTTTTGATCAAGTCTCTCCAAGATGATGACACACCAGCTGTGGTCAGGCAGGTCATCGCTTCTGGATCTGCTTTATTCCGTTCCACCCTCCAAAAATTCGCACTTCAGGGTTTGCATTCTAGTGAGTTGGATGAGTTTCTTCAATCTTCCTGGACATGGATGCTTAAGTTCAAGGATGAAGTATGCTCTTTGGCTTTCAGGCAAGTAAACAGTGGTGTAAAGTTATGCGCTATGAAATTTGTGGAAGCGCTTATTCTTTTGTATACACCTGACCCTAGCGTCTCTTTGGAGTCTCCTTCTCATCAAGTTACCTGTCCTGCAGGAATTCAAGCAGATTTTAATATATCTATTCTTCGTGGGGGGCATCCTGTTTTGAATATTGGAGACTTGTCGATTGAGGCCAGCCAGAAATTGGCTTTACTTCTTGATCAGCTTAGGCACCCTGCGGCAAAATCTCTCAATAGCTCCACGATTATTTTTCTTATCAATAGTCTTTCATCAGTTGCAAAGAAACGTCCTGCATTTTGTGGACGAATCCTGCCTGTTCTACTGAGCTTGGATGCCCCAAGCTTTCTCAAAGGAGTGCATGCAGCAGCAGCAAATCTTGCCCTCAAGACTGTATTTCTCTCCTGCTTGGAATGTACACATCCGGCTGCTGCACCGTGGAAGGACCGGTTGATCGGGGCTCTGAAAGAGATAGAAGGTGGCAGTCGGGCTGAGAAAGCTGAAGATCTGTTTTACACAACTAACGGAAGCATTCAAGACAAAGACAGTGTAGAGGATACGAAGGTATCAGTGGAAGATAATTCTCTCTATGCAAGTTCTGTTGCTGCGGAAAGTAACTTTGGTAGGAAAAGATCTGGATCAGAATACAGTATTGATCTGAATGGAGATGCTTTGACTGGAAAACGATCAAGAATAACACCTTCTGTGTCAGGAGAATCTACTGAAGGATTAAATGGTAACAGTGTTGGCTCTCTACCTCTGGTTACTTCTACTTCAACTGGACCAAGTAATAGCAGAGTGAGTGATACTGGACCTGTTCAGCAACTGGTTGCTATGTTTGGAGCATTGGTTGCCCAGGGTGAAAAAGCAATTGGATCTCTAGAGATCCTTATTTCAAGTATTTCTGCGGATTTGCTGGCAGATGTTGTGATGGCTAATATGCATAATATTCTACTAAATGGTTCCTCTTATGCTGATGGCACCGATGAGCTGGTGATGAACATGTCTATAGTTGGCAGTGATGCACAAAATAAATATCCACCATCATTTGTGGCTGGTGTTCTTTCACTGTCAACTGCATTCCCACCAGTTGCTGCCCTGATAAATCCTCACACAGCGAAAACGGAAAATGAAGGTGAAGAACTCTGTGTGAATCATGTGGACCAGCAGATATTTCCGGCTGTAGATGCAGTTCTTGCAAGTGGCCTATCAGCCTCTTCAGTAAATGAAGAGGGCAGTATTGAGCTTCCGCCAAATGTGGATTACAGAGGGAATATAGAAAGTGGTATACCTGGACTAGATTCTTCTGCTCAACGTTATGTGTTATCAGAAGCCCCTGTTACTTCTGTATTGGGTTCTACAAATGTGGAGGCCGCCAGCAAGAACCAAGATGTGACTGTCAGTGGAGAACTTCTAGTCGCTGTGATTCCATCAGCGTCAGTGGATAAGTCGGAGGAGTTTAGTCCAAAGGCGACTGGCATAGGTTCTAACATCTTGGTTTCCTCAACGGCAACTTCACTTGCTTCTGCGCCTCAGTTTGTCTTGCCTAAGATATCAGCACCTGTTGTCAACCTTTCTGATGAAGAGAAAGACAGTTTGCAGAAGCTGGTGTTTTTGCGCATTGTTGAAGCATATAAACAAGTATCAATGTCTGGTGGCTCACAACTTCGCTTTTCTCTTCTTGCTCACTTGGGAGTTGAGTTTCCTTCAGAGTTGGACCCTTGGAAAATGTTACAGGAACACATTCTCTCTGATTATTTGAGTCATGAGGGACATGAGTTGACTGTGCGGGTACTCTACAGGCTATACGGGGAGGCAGAAGCAGAACAAGATTTCTTCTCGTCAACTACTGCTGCGTCTGCATATGAAAGTTTCTTGGTGGCTGTGGCTGAAGCACTTAGAGATTCTTTTCCACCGTCTGATAAATCATTAAGTAAATTGCTCGGAGATTCTCCATTTCTGCCGAAATCAGTTCTGAAGTTGTTGGAATCGTTTTGCTGTCCTGAAAGTGGTGACAAGGTTGAAAAGGACTTACCTAGCGGAGACCGTGTTACTCAAGGTCTCAGTGCTGTTTGGAGTCTGATTTTAACGAGACCTGGAATCCGGAATGAGTGCCTGAAGATCGCTTTGCAGAGTGCTGTTCATCACTTGGAAGAGATTCGCATGAAAGCAATCCGCCTGGTGGCAAACAAGCTCTATTCTTTATCATTCATTACACAACAGATTGAGGACTTTGCAAAGGACAAGCTATTTTCCGTAGTGAGTTGCATTTCTTCAGAGAAAGGAGGTGCTGAAACATTGAGCAATGATTGTGTAAAGCCGGTGATCGGTGCGGGAATGGAACCGTCCTCAGAAGCAACATCAGCAACTTCAGTAACCGAAGCCCAACGCTGCTTGTCACTCTATTTTGCACTATGTACCAAGAAGCACGCCCTTTTTGTCCATGTGTTCAGCATTTACAAAGATGCATCAGATCCTGTTAAGCAGGCTATCCATCGTCAAATCCCAATACTAGTTCGTACTATGGGCTCATCATCTGAGCTTCTTAAAATTATAGCAGACCCGCCGAGTGGAAGTGAGAACCTTCTAATGCAGGTCCTTCAAACCCTTACTGAGGGGGCTAAGCCTTCTTCAGAGTTGATACACACTATAAGAAAGTTGTTTGATACAAGAATAAAGGATGTAGAAATTATTTTCCCAATATTGCCGTTCCTGCCGAGAGACGATGTTCTACGTGTTTTCCCCCATATGGTCAATCTTCCTATGGAGAAATTCCAAGTCGCACTCTCTCGTGTCCTGCAGGGATCATCTCAGTCTGGTCCAGTGCTTACTCCATCGGAAGTTTTAATTGCTATCCATAGCATTGACCCAGCGAGAGATGGAATACCGCTTAAACAGGTAACAGATGCATGCAATACCTGTTTCGCACAGAGGCAGACATTCACTCAACAGGTTTTAGCAGGCGTTCTGAATCAACTGGTCCAGCAAATTCCACTGCCGATGTTATTCATGCGGACAGTTCTACAAGCTATCGGTGCTTTTCCAGCTCTGTCCGACTTCATCCTGGAGATCCTTTCTCGTCTCGTTAGCAAACAGATATGGAAATATCCGAAACTGTGGGTAGGATTCTTGAAATGTGCACAGTCAACACAGCCTCAATCATACAAGGTCTTACTACAGCTTCCTCCAACTCAGCTGGGAAATGCATTGACTAAAGTTTCTGCCTTAAGAGCTCCTCTGGCCGCGCATGCCAGCCAGCCAGATATTCAGTCTTCACTTCCAAGATCTACATTGGCTGTTCTTGGACTTGTCCCTGATTCTCAGGGAACACAGACGAGTCAAGTACAAGCGAGTGAAACACAAGAGAGTCAAGTGCAAGCGAGTGAAACACAAGAGAGTCAGATGCAAGCGAGTGAAACACAAGAGAGTCAGATGCAAGCGAGTGAAACACAAGAGAGTCAGATGCAAGCGAGTGAGACACAAGAGAGTCCGGGAGAGCAGCAAGCAAGCGAGTCGCAAGAGCAAACGAGCCAGTCTCAGCAAGTCTCTGTACCATTGAGTCACTCTGAAACAGATATTAATCAGGAAATCAGTCAGGTGGTTGCCAGTCATTCTCAAAGCAGTCCTATTGGTACGGGCCGGTCAGATACGAGTCAGTCTCAGAGCAGTCCCGTTGGTGCGGGGCAGTCTGAAATGAGTCAGACCACCCATGTGTCGGACTCGGATCCTCCTCCAGCACCAACGAGCCACACCCATACATCATCAGATTCTCAAGTGTCGGACCAGAGAGAGCCCGATGATGAGAAGATGGAGGACACGGCAACCTCAGAAAATGAGAGGTCCGAAGCTGAGAAGTCAAAGGAGTCTTCTGCAGAAGAAGAAGACCGAGTGTAA |
| Protein: MVGTIMASSYKLQGLARSAKSATDLPPKLHRLRNLRLNLKGDPSASFPTELLPLLFDLLSDQFGAVRKFVAEILGEIGLNYVELLPEIVPLLIKSLQDDDTPAVVRQVIASGSALFRSTLQKFALQGLHSSELDEFLQSSWTWMLKFKDEVCSLAFRQVNSGVKLCAMKFVEALILLYTPDPSVSLESPSHQVTCPAGIQADFNISILRGGHPVLNIGDLSIEASQKLALLLDQLRHPAAKSLNSSTIIFLINSLSSVAKKRPAFCGRILPVLLSLDAPSFLKGVHAAAANLALKTVFLSCLECTHPAAAPWKDRLIGALKEIEGGSRAEKAEDLFYTTNGSIQDKDSVEDTKVSVEDNSLYASSVAAESNFGRKRSGSEYSIDLNGDALTGKRSRITPSVSGESTEGLNGNSVGSLPLVTSTSTGPSNSRVSDTGPVQQLVAMFGALVAQGEKAIGSLEILISSISADLLADVVMANMHNILLNGSSYADGTDELVMNMSIVGSDAQNKYPPSFVAGVLSLSTAFPPVAALINPHTAKTENEGEELCVNHVDQQIFPAVDAVLASGLSASSVNEEGSIELPPNVDYRGNIESGIPGLDSSAQRYVLSEAPVTSVLGSTNVEAASKNQDVTVSGELLVAVIPSASVDKSEEFSPKATGIGSNILVSSTATSLASAPQFVLPKISAPVVNLSDEEKDSLQKLVFLRIVEAYKQVSMSGGSQLRFSLLAHLGVEFPSELDPWKMLQEHILSDYLSHEGHELTVRVLYRLYGEAEAEQDFFSSTTAASAYESFLVAVAEALRDSFPPSDKSLSKLLGDSPFLPKSVLKLLESFCCPESGDKVEKDLPSGDRVTQGLSAVWSLILTRPGIRNECLKIALQSAVHHLEEIRMKAIRLVANKLYSLSFITQQIEDFAKDKLFSVVSCISSEKGGAETLSNDCVKPVIGAGMEPSSEATSATSVTEAQRCLSLYFALCTKKHALFVHVFSIYKDASDPVKQAIHRQIPILVRTMGSSSELLKIIADPPSGSENLLMQVLQTLTEGAKPSSELIHTIRKLFDTRIKDVEIIFPILPFLPRDDVLRVFPHMVNLPMEKFQVALSRVLQGSSQSGPVLTPSEVLIAIHSIDPARDGIPLKQVTDACNTCFAQRQTFTQQVLAGVLNQLVQQIPLPMLFMRTVLQAIGAFPALSDFILEILSRLVSKQIWKYPKLWVGFLKCAQSTQPQSYKVLLQLPPTQLGNALTKVSALRAPLAAHASQPDIQSSLPRSTLAVLGLVPDSQGTQTSQVQASETQESQVQASETQESQMQASETQESQMQASETQESQMQASETQESPGEQQASESQEQTSQSQQVSVPLSHSETDINQEISQVVASHSQSSPIGTGRSDTSQSQSSPVGAGQSEMSQTTHVSDSDPPPAPTSHTHTSSDSQVSDQREPDDEKMEDTATSENERSEAEKSKESSAEEEDRV |